{
  "id": "bmont",
  "acronym": "BMONT",
  "name": "Biomarker Ontology",
  "category": "health",
  "kind": "ontology",
  "description": "An application ontology that represents comprehensive knowledge involving a variety of fields of medical and biological aspects.",
  "formats": [
    "OWL"
  ],
  "license": "CC BY 4.0",
  "homepage": "https://github.com/SCAI-BIO/BiomarkerOntology",
  "repository": "https://github.com/SCAI-BIO/BiomarkerOntology",
  "download": "http://purl.obolibrary.org/obo/bmont.owl",
  "ols": "bmont",
  "obo": "bmont",
  "bioportal": "BMONT",
  "bioregistry": "bmont",
  "publications": [],
  "usedBy": [],
  "tags": [
    "obo",
    "ontology"
  ],
  "url": "https://schemascope.org/o/bmont/",
  "evaluation": {
    "links": {
      "homepage": {
        "url": "https://github.com/SCAI-BIO/BiomarkerOntology",
        "code": 200,
        "state": "ok",
        "checkedAt": "2026-10-26T02:40:44.497Z"
      },
      "repository": {
        "url": "https://github.com/SCAI-BIO/BiomarkerOntology",
        "code": 200,
        "state": "ok",
        "checkedAt": "2026-10-26T02:40:44.497Z"
      },
      "download": {
        "url": "http://purl.obolibrary.org/obo/bmont.owl",
        "code": 200,
        "state": "ok",
        "resolvedUrl": "https://raw.githubusercontent.com/SCAI-BIO/BiomarkerOntology/main/BMONT.owl",
        "checkedAt": "2026-10-26T02:40:44.366Z"
      }
    },
    "github": {
      "slug": "SCAI-BIO/BiomarkerOntology",
      "stars": 0,
      "forks": 0,
      "openIssues": 1,
      "pushedAt": "2025-07-31T12:36:53Z",
      "archived": false,
      "license": null,
      "source": "https://api.github.com/repos/SCAI-BIO/BiomarkerOntology",
      "fetchedAt": "2026-10-26T02:40:44.575Z"
    },
    "ols": {
      "portal": "OLS (EMBL-EBI)",
      "id": "bmont",
      "api": "v2",
      "title": "Biomarker Ontology",
      "iri": "http://purl.obolibrary.org/obo/bmont.owl",
      "versionIri": "http://purl.obolibrary.org/obo/bmont/releases/2025-06-20/bmont.owl",
      "version": "2025-06-20",
      "releaseDate": "2025-06-20",
      "terms": 640,
      "properties": 171,
      "individuals": 0,
      "importsFrom": [
        "ado",
        "afo",
        "bfo",
        "caro",
        "chebi",
        "chmo",
        "cl",
        "cmo",
        "dc",
        "dcterms",
        "doid",
        "efo",
        "go",
        "gsso",
        "hp",
        "iao",
        "ico",
        "ido",
        "maxo",
        "mi",
        "mmo",
        "mondo",
        "mp",
        "mpath",
        "ncit",
        "oae",
        "obcs",
        "obi",
        "ogms",
        "oio",
        "omit",
        "omo",
        "ons",
        "opmi",
        "owl",
        "pato",
        "pr",
        "rdfs",
        "ro",
        "scdo",
        "schemaorg_https",
        "sio",
        "skos",
        "so",
        "stato",
        "symp",
        "uberon"
      ],
      "exportsTo": [
        "psdo"
      ],
      "languages": [
        "da",
        "en",
        "en-us",
        "zh"
      ],
      "loaded": "2026-10-25T00:08:01.321256655",
      "sourceFileTimestamp": "Sun Oct 25 00:07:59 UTC 2026",
      "obsolete": false,
      "status": "LOADED",
      "page": "https://www.ebi.ac.uk/ols4/ontologies/bmont",
      "source": "https://www.ebi.ac.uk/ols4/api/v2/ontologies/bmont",
      "fetchedAt": "2026-10-26T02:40:44.510Z"
    },
    "obo": {
      "id": "bmont",
      "status": "active",
      "domain": "health",
      "license": "CC BY 4.0",
      "usages": [],
      "source": "https://obofoundry.org/registry/ontologies.jsonld",
      "fetchedAt": "2026-10-26T02:37:39.556Z"
    },
    "bioportal": null,
    "citations": [],
    "git": {
      "commit": "52a86d0a3b190bb715261a6bbe056d56ec0dfccd",
      "ref": "main",
      "headTag": null,
      "latestTag": null,
      "tagCount": 0,
      "tagDates": [],
      "url": "https://github.com/SCAI-BIO/BiomarkerOntology/tree/52a86d0a3b190bb715261a6bbe056d56ec0dfccd",
      "source": "https://github.com/SCAI-BIO/BiomarkerOntology.git/info/refs?service=git-upload-pack",
      "fetchedAt": "2026-10-26T02:40:44.207Z"
    },
    "tib": null,
    "dashboard": {
      "ns": "bmont",
      "checks": {
        "FP01 Open": "PASS",
        "FP02 Common Format": "PASS",
        "FP03 URIs": "PASS",
        "FP04 Versioning": "ERROR",
        "FP05 Scope": "PASS",
        "FP06 Textual Definitions": "WARN",
        "FP07 Relations": "INFO",
        "FP08 Documented": "PASS",
        "FP09 Plurality of Users": "ERROR",
        "FP11 Locus of Authority": "PASS",
        "FP12 Naming Conventions": "PASS",
        "FP16 Maintenance": "PASS",
        "FP20 Responsiveness": "PASS",
        "ROBOT Report": "WARN"
      },
      "robot": {
        "ERROR": 0,
        "INFO": 0,
        "WARN": 20
      },
      "consistent": true,
      "unsatisfiable": 0,
      "classes": 105,
      "axioms": 591,
      "owl2dl": false,
      "reusedPct": 30.77,
      "usedBy": [
        "psdo"
      ],
      "oboScore": null,
      "summary": "ERROR",
      "checkedVersion": "http://purl.obolibrary.org/obo/bmont/releases/2025-06-20/bmont.owl",
      "checkedAt": "2025-12-09T20:05:24.806Z",
      "page": "https://dashboard.obofoundry.org/dashboard/bmont/dashboard.html",
      "source": "https://dashboard.obofoundry.org/dashboard/dashboard-results.json",
      "fetchedAt": "2026-10-26T02:37:39.856Z"
    },
    "quality": null,
    "oops": null,
    "releases": {
      "dates": [
        "2025-06-20"
      ],
      "lastYear": 0,
      "from": "OLS version IRI"
    },
    "bioregistry": {
      "prefix": "bmont",
      "name": "Biomarker Ontology",
      "mappings": {
        "aberowl": "BMONT",
        "bioportal": "BMONT",
        "obofoundry": "bmont",
        "ols": "bmont",
        "ontobee": "BMONT"
      },
      "dependsOn": [],
      "appearsIn": [],
      "license": "CC-BY-4.0",
      "version": "Version Release: 0.5.8",
      "deprecated": false,
      "page": "https://bioregistry.io/bmont",
      "source": "https://bioregistry.io/api/registry/bmont",
      "fetchedAt": "2026-10-26T02:40:44.108Z"
    },
    "artifact": {
      "source": "https://raw.githubusercontent.com/SCAI-BIO/BiomarkerOntology/main/BMONT.owl",
      "isRdf": true,
      "versionIri": "http://purl.obolibrary.org/obo/bmont/releases/2025-06-20/bmont.owl",
      "versionInfo": "2025-06-20",
      "etag": "\"3f7383f9e7bb713f263b8c7d2d3392ed997f73ecbaa0591d5442abb5f67058c9\"",
      "contentType": "text/plain",
      "fetchedAt": "2026-10-26T02:40:44.461Z"
    },
    "score": 63,
    "gross": 64,
    "earned": 64,
    "possible": 100,
    "qualityApplies": true,
    "penalty": {
      "score": -1,
      "reason": "1.2 years → 4 × max(0, 1.2 − 1)",
      "steps": [
        {
          "label": "Time since last activity",
          "pts": -1,
          "detail": "1.2 years → 4 × max(0, 1.2 − 1)"
        },
        {
          "label": "Inactive status",
          "pts": 0,
          "detail": "not archived, legacy or inactive"
        },
        {
          "label": "Consistency",
          "pts": 0,
          "detail": "consistent, no unsatisfiable classes"
        }
      ]
    },
    "consistent": true,
    "grade": "C",
    "fair": 44,
    "breakdown": {
      "findable": {
        "score": 9,
        "max": 12,
        "steps": [
          {
            "label": "Persistent identifier (F1)",
            "pts": 4,
            "max": 4,
            "detail": "purl.obolibrary.org"
          },
          {
            "label": "Indexed in services (F4)",
            "pts": 5,
            "max": 5,
            "detail": "4: OLS, BioPortal, OBO Foundry, Bioregistry"
          },
          {
            "label": "Citable reference (F2)",
            "pts": 0,
            "max": 3,
            "detail": "no reference publication listed"
          }
        ],
        "notes": [
          "Citable reference (F2): no reference publication listed"
        ]
      },
      "accessible": {
        "score": 12,
        "max": 12,
        "steps": [
          {
            "label": "Homepage reachable",
            "pts": 3,
            "max": 3,
            "detail": "HTTP 200"
          },
          {
            "label": "Artefact retrievable over HTTP(S) (A1)",
            "pts": 6,
            "max": 6,
            "detail": "download HTTP 200"
          },
          {
            "label": "Metadata persists in a registry (A2)",
            "pts": 3,
            "max": 3,
            "detail": "OBO Foundry, Bioregistry"
          }
        ],
        "notes": []
      },
      "interoperable": {
        "score": 12,
        "max": 12,
        "steps": [
          {
            "label": "Formal machine-readable format (I1)",
            "pts": 5,
            "max": 5,
            "detail": "OWL"
          },
          {
            "label": "Semantic-web IRIs (I2)",
            "pts": 3,
            "max": 3,
            "detail": "OWL"
          },
          {
            "label": "References other vocabularies (I3)",
            "pts": 4,
            "max": 4,
            "detail": "imports 41: ado, afo, bfo, caro, chebi, chmo, cl, cmo…"
          }
        ],
        "notes": []
      },
      "reusable": {
        "score": 11,
        "max": 12,
        "steps": [
          {
            "label": "Clear license (R1.1)",
            "pts": 5,
            "max": 5,
            "detail": "CC BY 4.0"
          },
          {
            "label": "Release provenance (R1.2)",
            "pts": 4,
            "max": 4,
            "detail": "2025-06-20 (version IRI in the artefact)"
          },
          {
            "label": "Community standards (R1.3)",
            "pts": 2,
            "max": 3,
            "detail": "OBO principles: 9/13 checks pass"
          }
        ],
        "notes": [
          "Community standards (R1.3): OBO principles: 9/13 checks pass"
        ]
      },
      "quality": {
        "score": 17,
        "max": 20,
        "steps": [
          {
            "label": "Logical consistency",
            "pts": 10,
            "max": 10,
            "detail": "consistent, 0 unsatisfiable classes (OBO Dashboard)"
          },
          {
            "label": "OWL 2 DL profile",
            "pts": 0,
            "max": 2,
            "detail": "outside OWL 2 DL"
          },
          {
            "label": "Upper-ontology alignment",
            "pts": 3,
            "max": 3,
            "detail": "imports BFO"
          },
          {
            "label": "Standard relations (RO)",
            "pts": 1,
            "max": 1,
            "detail": "imports RO"
          },
          {
            "label": "ROBOT report: no errors",
            "pts": 2,
            "max": 2,
            "detail": "0 errors"
          },
          {
            "label": "ROBOT report: warning density",
            "pts": 0,
            "max": 1,
            "detail": "20 warnings / 105 classes = 0.19"
          },
          {
            "label": "Pitfall scan: no critical pitfalls",
            "pts": 1,
            "max": 1,
            "detail": "no pitfall scan yet; ROBOT report has 0 errors"
          }
        ],
        "notes": [
          "OWL 2 DL profile: outside OWL 2 DL",
          "ROBOT report: warning density: 20 warnings / 105 classes = 0.19"
        ]
      },
      "maintenance": {
        "score": 2,
        "max": 16,
        "steps": [
          {
            "label": "Recency",
            "pts": 2,
            "max": 10,
            "detail": "2025-07-31 → 14.8 months (≤ 2 years)"
          },
          {
            "label": "Release cadence (12 months)",
            "pts": 0,
            "max": 6,
            "detail": "0 releases (OLS version IRI)"
          }
        ],
        "notes": [
          "Recency: 2025-07-31 → 14.8 months (≤ 2 years)",
          "Release cadence (12 months): 0 releases (OLS version IRI)"
        ]
      },
      "adoption": {
        "score": 1,
        "max": 16,
        "steps": [
          {
            "label": "Documented adopting projects",
            "pts": 0,
            "max": 7,
            "detail": "0 projects"
          },
          {
            "label": "Reused by other ontologies",
            "pts": 1,
            "max": 4,
            "detail": "1: psdo"
          },
          {
            "label": "Community signal",
            "pts": 0,
            "max": 5,
            "detail": "max(stars 0 → 0, citations 0 → 0)"
          }
        ],
        "notes": [
          "Documented adopting projects: 0 projects",
          "Reused by other ontologies: 1: psdo",
          "Community signal: max(stars 0 → 0, citations 0 → 0)"
        ]
      }
    },
    "lastActivity": "2025-07-31T12:36:53.000Z",
    "adopterCount": 0,
    "reuseCount": 1,
    "importCount": 41,
    "registries": [
      "OLS",
      "BioPortal",
      "OBO Foundry",
      "Bioregistry"
    ],
    "evaluatedVersion": {
      "label": "2025-06-20",
      "from": "version IRI in the artefact",
      "value": "http://purl.obolibrary.org/obo/bmont/releases/2025-06-20/bmont.owl",
      "inArtefact": true,
      "all": [
        {
          "label": "2025-06-20",
          "from": "version IRI in the artefact",
          "value": "http://purl.obolibrary.org/obo/bmont/releases/2025-06-20/bmont.owl",
          "inArtefact": true
        },
        {
          "label": "2025-06-20",
          "from": "version info in the artefact",
          "value": "2025-06-20",
          "inArtefact": true
        },
        {
          "label": "2025-06-20",
          "from": "OLS",
          "value": "http://purl.obolibrary.org/obo/bmont/releases/2025-06-20/bmont.owl"
        },
        {
          "label": "commit 52a86d0",
          "from": "main at evaluation time",
          "value": "52a86d0a3b190bb715261a6bbe056d56ec0dfccd"
        }
      ]
    },
    "evaluatedAt": "2026-10-26T02:40:44.785Z",
    "runId": "2026-10-26T02-37-38Z",
    "adopters": []
  },
  "history": [
    {
      "runId": "2026-10-26T02-37-38Z",
      "at": "2026-10-26T03:31:18.947Z",
      "score": 63,
      "grade": "C",
      "fair": 44,
      "version": "2025-06-20",
      "terms": 640,
      "stars": 0,
      "license": "CC BY 4.0",
      "lastActivity": "2025-07-31T12:36:53.000Z",
      "adopters": 0,
      "links": {
        "homepage": "ok",
        "repository": "ok",
        "download": "ok"
      },
      "archived": false,
      "rubric": "3.4",
      "snapshot": "https://schemascope.org/runs/2026-10-26T02-37-38Z.json"
    }
  ],
  "changes": [],
  "recordProvenance": {
    "source": "harvest",
    "retrievedAt": "2026-10-25T21:49:00Z",
    "registries": [
      {
        "registry": "Bioregistry",
        "key": "bioregistry",
        "id": "bmont",
        "url": "https://bioregistry.io/api/registry/bmont",
        "retrievedAt": "2026-10-25T21:49:00Z"
      },
      {
        "registry": "OBO Foundry",
        "key": "obo",
        "id": "bmont",
        "url": "https://obofoundry.org/ontology/bmont.html",
        "retrievedAt": "2026-10-25T21:49:00Z"
      },
      {
        "registry": "OLS (EMBL-EBI)",
        "key": "ols",
        "id": "bmont",
        "url": "https://www.ebi.ac.uk/ols4/ontologies/bmont",
        "retrievedAt": "2026-10-25T21:49:00Z"
      }
    ],
    "fields": {
      "acronym": "Bioregistry",
      "name": "Bioregistry",
      "description": "Bioregistry",
      "homepage": "Bioregistry",
      "repository": "Bioregistry",
      "download": "Bioregistry",
      "formats": "Bioregistry",
      "license": "Bioregistry",
      "ols": "Bioregistry",
      "obo": "Bioregistry",
      "bioportal": "Bioregistry",
      "tags": "Bioregistry"
    }
  },
  "evaluationProvenance": {
    "@context": {
      "prov": "http://www.w3.org/ns/prov#",
      "schemascope": "https://schemascope.org/ns#"
    },
    "@id": "https://schemascope.org/o/bmont/#evaluation",
    "@type": "prov:Entity",
    "prov:specializationOf": {
      "@id": "http://purl.obolibrary.org/obo/bmont.owl",
      "schemascope:evaluatedVersion": "http://purl.obolibrary.org/obo/bmont/releases/2025-06-20/bmont.owl"
    },
    "prov:wasGeneratedBy": {
      "@id": "https://schemascope.org/runs/2026-10-26T02-37-38Z",
      "@type": "prov:Activity",
      "prov:startedAtTime": "2026-10-26T02:37:38.997Z",
      "prov:endedAtTime": "2026-10-26T03:31:18.947Z",
      "prov:wasAssociatedWith": {
        "@id": "https://schemascope.org/ns#evaluator",
        "@type": "prov:SoftwareAgent",
        "schemascope:version": "2.0.0"
      },
      "prov:used": [
        {
          "@id": "https://github.com/SCAI-BIO/BiomarkerOntology",
          "prov:atTime": "2026-10-26T02:40:44.497Z"
        },
        {
          "@id": "https://github.com/SCAI-BIO/BiomarkerOntology",
          "prov:atTime": "2026-10-26T02:40:44.497Z"
        },
        {
          "@id": "http://purl.obolibrary.org/obo/bmont.owl",
          "prov:atTime": "2026-10-26T02:40:44.366Z"
        },
        {
          "@id": "https://raw.githubusercontent.com/SCAI-BIO/BiomarkerOntology/main/BMONT.owl",
          "prov:atTime": "2026-10-26T02:40:44.461Z"
        },
        {
          "@id": "https://github.com/SCAI-BIO/BiomarkerOntology.git/info/refs?service=git-upload-pack",
          "prov:atTime": "2026-10-26T02:40:44.207Z"
        },
        {
          "@id": "https://api.github.com/repos/SCAI-BIO/BiomarkerOntology",
          "prov:atTime": "2026-10-26T02:40:44.575Z"
        },
        {
          "@id": "https://www.ebi.ac.uk/ols4/api/v2/ontologies/bmont",
          "prov:atTime": "2026-10-26T02:40:44.510Z"
        },
        {
          "@id": "https://obofoundry.org/registry/ontologies.jsonld",
          "prov:atTime": "2026-10-26T02:37:39.556Z"
        },
        {
          "@id": "https://dashboard.obofoundry.org/dashboard/dashboard-results.json",
          "prov:atTime": "2026-10-26T02:37:39.856Z"
        },
        {
          "@id": "https://bioregistry.io/api/registry/bmont",
          "prov:atTime": "2026-10-26T02:40:44.108Z"
        }
      ]
    },
    "prov:generatedAtTime": "2026-10-26T02:40:44.785Z"
  }
}