Ontology

AMPHX

The Amphioxus Development and Anatomy Ontology

An ontology for the development and anatomy of Amphioxus (Branchiostoma lanceolatum).

oboontology
D40

FAIR 44/48

Version 2020-12-18

Evaluated 26 Oct 2026

How scores work

Source & access

Homepagegithub.com DownloadCanonical file / PURL Browse in OLSEMBL-EBI Ontology Lookup ServiceBrowse in BioPortalNCBO BioPortalBrowse in OBO FoundryOBO Foundry registry

Portals & registries

SourceIDVersionClassesPropertiesIndividualsLoaded
OLS (EMBL-EBI)amphx2020-12-1840310025 Oct 2026
OBO Dashboardamphx2020-12-18403——9 Dec 2025

Ontology IRI http://purl.obolibrary.org/obo/amphx/amphx.owl
Version IRI http://purl.obolibrary.org/obo/amphx/releases/2020-12-18/amphx.owl

Languages en

Imports from (5)
CL GO IAO RO UBERON

Logical consistency
consistent · 0 unsatisfiable
OWL 2 DL
no
ROBOT report
2 errors · 370 warnings · 30 info
OBO principles
FP01FP02FP03FP04FP05FP06FP07FP08FP09FP11FP12FP16FP20
Axioms
2,717 · 4.77% entities reused

Also registered as
aberowl: AMPHX bioportal: AMPHX obofoundry: amphx ols: amphx ontobee: AMPHX wikidata.entity: Q112972859

Automated evaluation

F Findable FAIR9/12
  • Persistent identifier (F1)purl.obolibrary.org+4
  • Indexed in services (F4)4: OLS, BioPortal, OBO Foundry, Bioregistry+5
  • Citable reference (F2)no reference publication listed0
A Accessible FAIR12/12
  • Homepage reachableHTTP 200+3
  • Artefact retrievable over HTTP(S) (A1)download HTTP 200+6
  • Metadata persists in a registry (A2)OBO Foundry, Bioregistry+3
I Interoperable FAIR12/12
  • Formal machine-readable format (I1)OWL, OBO+5
  • Semantic-web IRIs (I2)OWL, OBO+3
  • References other vocabularies (I3)imports 5: cl, go, iao, ro, uberon+4
R Reusable FAIR11/12
  • Clear license (R1.1)CC BY 3.0+5
  • Release provenance (R1.2)2020-12-18 (version IRI in the artefact)+4
  • Community standards (R1.3)OBO principles: 9/13 checks pass+2
Q Ontology consistency & quality11/20
  • Logical consistencyconsistent, 0 unsatisfiable classes (OBO Dashboard)+10
  • OWL 2 DL profileoutside OWL 2 DL0
  • Upper-ontology alignmentno BFO/COB/DOLCE import found0
  • Standard relations (RO)imports RO+1
  • ROBOT report: no errors2 errors0
  • ROBOT report: warning density370 warnings / 403 classes = 0.920
  • Pitfall scan: no critical pitfallsno pitfall scan yet; ROBOT report has 2 errors0
M Maintenance0/16
  • Recency2022-10-07 → 48.6 months (older / unknown)0
  • Release cadence (12 months)0 releases (GitHub releases)0
U Community adoption0/16
  • Documented adopting projects0 projects0
  • Reused by other ontologies00
  • Community signalmax(stars 3 → 0, citations 0 → 0)0
P Penalties (inactivity & inconsistency)-15
  • Time since last activity4.1 years → 4 × max(0, 4.1 − 1)-12
  • Inactive statusnot archived, legacy or inactive0
  • Consistencyconsistent, no unsatisfiable classes0
  • ROBOT report errors2 errors-3

FAIR subtotal 44/48 · earned 55/100 − 15 inactivity = 40/100 → grade D

Community adoption 0

No adopting projects documented yet.

Know a project that uses AMPHX? Suggest it.

History & changes 1 run

History starts with the first archived run; changes appear after the next evaluation.

RunScoreFAIRVersion evaluatedTermsSnapshot
26 Oct 2026, 03:31 UTC40 D442020-12-18403JSON

Provenance

Every fact on this page was fetched automatically. Each row shows where it came from and when. If a source fails, the last good value is kept and marked “carried forward”.

FactSourceRetrieved
Homepage link check (HTTP 200)github.com26 Oct 2026, 02:38 UTC
Repository link check (HTTP 200)github.com26 Oct 2026, 02:38 UTC
Download link check (HTTP 200)purl.obolibrary.org26 Oct 2026, 02:38 UTC
Artefact header (version IRI)raw.githubusercontent.com26 Oct 2026, 02:38 UTC
Git refs (commit a52b96d, latest tag v2020-12-18)github.com26 Oct 2026, 02:38 UTC
GitHub repository statisticsapi.github.com26 Oct 2026, 02:38 UTC
OLS classes, imports, version & releaseebi.ac.uk26 Oct 2026, 02:38 UTC
OBO Foundry status, license & usagesobofoundry.org26 Oct 2026, 02:37 UTC
Bioregistry mappings, dependencies & reusebioregistry.io26 Oct 2026, 02:38 UTC
OBO Dashboard (checked 9 Dec 2025)dashboard.obofoundry.org26 Oct 2026, 02:37 UTC

Run 2026-10-26T02-37-38Z · evaluator v2.0.0 · rubric v3.4 · entry.json · run snapshot