Ontology

CRYOEM

Cryo Electron Microscopy ontology

Ontology that describes data types and image processing operations in Cryo Electron Microscopy of Single Particles

bioimagingelectron microscopyontologystructural biology
E9

FAIR 28/48

Version 2021-03-09

Evaluated 26 Oct 2026

How scores work

Source & access

Homepagescipion.i2pc.es Repositorygithub.com DownloadCanonical file / PURL Browse in OLSEMBL-EBI Ontology Lookup ServiceBrowse in BioPortalNCBO BioPortal

Portals & registries

SourceIDVersionClassesPropertiesIndividualsLoaded
OLS (EMBL-EBI)cryoem2021-03-0911120021 Oct 2026

Ontology IRI http://scipion.i2pc.es/ontology/cryoem.owl
Version IRI http://scipion.i2pc.es/ontology/cryoem/releases/2021-03-09/cryoem.owl

Languages en

Imports from (1)
IAO

Also registered as
aberowl: CRYOEM bioportal: CRYOEM fairsharing: FAIRsharing.q47I0t ols: cryoem

Automated evaluation

F Findable FAIR5/12
  • Persistent identifier (F1)no PURL / w3id / DOI for the artefact0
  • Indexed in services (F4)4: OLS, BioPortal, Bioregistry, FAIRsharing+5
  • Citable reference (F2)no reference publication listed0
A Accessible FAIR6/12
  • Homepage reachableHTTP fetch failed0
  • Artefact retrievable over HTTP(S) (A1)only the source repository is reachable (no direct download)+3
  • Metadata persists in a registry (A2)Bioregistry+3
I Interoperable FAIR10/12
  • Formal machine-readable format (I1)OWL+5
  • Semantic-web IRIs (I2)OWL+3
  • References other vocabularies (I3)imports 1: iao+2
R Reusable FAIR7/12
  • Clear license (R1.1)CC BY 3.0+5
  • Release provenance (R1.2)2021-03-09 (OLS); not declared inside the artefact+2
  • Community standards (R1.3)no independent compliance report (not on the OBO Dashboard)0
Q Ontology consistency & quality0/20
  • Logical consistencynever checked by a reasoner0
  • OWL 2 DL profileprofile not checked0
  • Upper-ontology alignmentno BFO/COB/DOLCE import found0
  • Standard relations (RO)does not import the Relation Ontology0
  • ROBOT report: no errorsno ROBOT report available0
  • ROBOT report: warning densityno ROBOT report available0
  • Pitfall scan: no critical pitfallsno pitfall scan or ROBOT report yet0
M Maintenance0/16
  • Recency2021-03-09 → 67.6 months (older / unknown)0
  • Release cadence (12 months)0 releases (GitHub releases)0
U Community adoption0/16
  • Documented adopting projects0 projects0
  • Reused by other ontologies00
  • Community signalmax(stars 0 → 0, citations 0 → 0)0
P Penalties (inactivity & inconsistency)-19
  • Time since last activity5.6 years → 4 × max(0, 5.6 − 1)-19
  • Inactive statusnot archived, legacy or inactive0
  • Consistencynot yet checked by a reasoner0

FAIR subtotal 28/48 · earned 28/100 − 19 inactivity = 9/100 → grade E

Community adoption 0

No adopting projects documented yet.

Know a project that uses CRYOEM? Suggest it.

History & changes 1 run

History starts with the first archived run; changes appear after the next evaluation.

RunScoreFAIRVersion evaluatedTermsSnapshot
26 Oct 2026, 03:31 UTC9 E282021-03-09111JSON

Provenance

Every fact on this page was fetched automatically. Each row shows where it came from and when. If a source fails, the last good value is kept and marked “carried forward”.

FactSourceRetrieved
Homepage link check (HTTP fetch failed)scipion.i2pc.es26 Oct 2026, 02:48 UTC
Repository link check (HTTP 200)github.com26 Oct 2026, 02:48 UTC
Download link check (HTTP fetch failed)scipion.i2pc.es26 Oct 2026, 02:48 UTC
Git refs (commit 31c2fc9, latest tag v2021-03-09)github.com26 Oct 2026, 02:48 UTC
GitHub repository statisticsapi.github.com26 Oct 2026, 02:48 UTC
OLS classes, imports, version & releaseebi.ac.uk26 Oct 2026, 02:48 UTC
Bioregistry mappings, dependencies & reusebioregistry.io26 Oct 2026, 02:48 UTC

Run 2026-10-26T02-37-38Z · evaluator v2.0.0 · rubric v3.4 · entry.json · run snapshot