Ontology
EMAPA
Mouse Developmental Anatomy Ontology
An ontology for mouse anatomy covering embryonic development and postnatal stages.
Source & access
Homepageinformatics.jax.org
Repositorygithub.com
DownloadCanonical file / PURL
Browse in OLSEMBL-EBI Ontology Lookup ServiceBrowse in BioPortalNCBO BioPortalBrowse in OBO FoundryOBO Foundry registry
- homepage informatics.jax.org HTTP 200
- repository github.com HTTP 200
- download purl.obolibrary.org HTTP 200
Portals & registries
| Source | ID | Version | Classes | Properties | Individuals | Loaded |
|---|---|---|---|---|---|---|
| OLS (EMBL-EBI) | emapa | 2026-10-02 | 8,883 | 31 | 0 | 25 Oct 2026 |
| OBO Dashboard | emapa | 2026-09-04 | 8,883 | — | — | 16 Sept 2026 |
Ontology IRI http://purl.obolibrary.org/obo/emapa.owl
Version IRI http://purl.obolibrary.org/obo/emapa/releases/2026-10-02/emapa.owl
Languages en
Reused by (1)
ADO
- Logical consistency
- consistent · 0 unsatisfiable
- OWL 2 DL
- no
- ROBOT report
- 2 errors · 7,920 warnings · 0 info
- OBO principles
- FP01FP02FP03FP04FP05FP06FP07FP08FP09FP11FP12FP16FP20
- Axioms
- 70,442 · 0.63% entities reused
Also registered as
aberowl: EMAPA bioportal: EMAPA fairsharing: FAIRsharing.j0fa1d obofoundry: emapa ols: emapa ontobee: EMAPA wikidata.entity: Q113012656
Automated evaluation
F Findable FAIR12/12
- Persistent identifier (F1)purl.obolibrary.org+4
- Indexed in services (F4)5: OLS, BioPortal, OBO Foundry, Bioregistry, FAIRsharing+5
- Citable reference (F2)doi:10.1016/s0925-4773(98)00069-0+3
A Accessible FAIR12/12
- Homepage reachableHTTP 200+3
- Artefact retrievable over HTTP(S) (A1)download HTTP 200+6
- Metadata persists in a registry (A2)OBO Foundry, Bioregistry+3
I Interoperable FAIR10/12
- Formal machine-readable format (I1)OWL, OBO+5
- Semantic-web IRIs (I2)OWL, OBO+3
- References other vocabularies (I3)imports 2: iao, ro+2
R Reusable FAIR12/12
- Clear license (R1.1)CC BY 4.0+5
- Release provenance (R1.2)2026-10-02 (version IRI in the artefact)+4
- Community standards (R1.3)OBO principles: 11/13 checks pass+3
Q Ontology consistency & quality11/20
- Logical consistencyconsistent, 0 unsatisfiable classes (OBO Dashboard)+10
- OWL 2 DL profileoutside OWL 2 DL0
- Upper-ontology alignmentno BFO/COB/DOLCE import found0
- Standard relations (RO)imports RO+1
- ROBOT report: no errors2 errors0
- ROBOT report: warning density7920 warnings / 8883 classes = 0.890
- Pitfall scan: no critical pitfallsno pitfall scan yet; ROBOT report has 2 errors0
M Maintenance12/16
- Recency2026-10-02 → 0.8 months (≤ 3 months)+10
- Release cadence (12 months)1 release (GitHub releases)+2
U Community adoption5/16
- Documented adopting projects1 project+2
- Reused by other ontologies1: ado+1
- Community signalmax(stars 5 → 1, citations 100 → 2)+2
P Penalties (inactivity & inconsistency)-3
- Time since last activity0.1 years → 4 × max(0, 0.1 − 1)0
- Inactive statusnot archived, legacy or inactive0
- Consistencyconsistent, no unsatisfiable classes0
- ROBOT report errors2 errors-3
FAIR subtotal 46/48 · earned 74/100 − 3 inactivity = 71/100 → grade B
Community adoption 1
- informatics.jax.org
GXD
Source: OBO Foundry registry
Know a project that uses EMAPA? Suggest it.
History & changes 1 run
History starts with the first archived run; changes appear after the next evaluation.
| Run | Score | FAIR | Version evaluated | Terms | Snapshot |
|---|---|---|---|---|---|
| 26 Oct 2026, 03:31 UTC | 71 B | 46 | 2026-10-02 | 8,883 | JSON |
Provenance
Every fact on this page was fetched automatically. Each row shows where it came from and when. If a source fails, the last good value is kept and marked “carried forward”.
| Fact | Source | Retrieved |
|---|---|---|
| Homepage link check (HTTP 200) | informatics.jax.org | 26 Oct 2026, 02:54 UTC |
| Repository link check (HTTP 200) | github.com | 26 Oct 2026, 02:54 UTC |
| Download link check (HTTP 200) | purl.obolibrary.org | 26 Oct 2026, 02:54 UTC |
| Artefact header (version IRI) | raw.githubusercontent.com | 26 Oct 2026, 02:54 UTC |
| Git refs (commit ab72117, latest tag v2026-10-02) | github.com | 26 Oct 2026, 02:54 UTC |
| GitHub repository statistics | api.github.com | 26 Oct 2026, 02:54 UTC |
| OLS classes, imports, version & release | ebi.ac.uk | 26 Oct 2026, 02:54 UTC |
| OBO Foundry status, license & usages | obofoundry.org | 26 Oct 2026, 02:37 UTC |
| Bioregistry mappings, dependencies & reuse | bioregistry.io | 26 Oct 2026, 02:54 UTC |
| OBO Dashboard (checked 16 Sept 2026) | dashboard.obofoundry.org | 26 Oct 2026, 02:37 UTC |
| Crossref citations (doi:10.1016/s0925-4773(98)00069-0) | api.crossref.org | 26 Oct 2026, 02:54 UTC |
| Crossref citations (doi:10.1007/s00335-015-9584-9) | api.crossref.org | 26 Oct 2026, 02:54 UTC |
Run 2026-10-26T02-37-38Z · evaluator v2.0.0 · rubric v3.4 · entry.json · run snapshot
How to cite
- An internet-accessible database of mouse developmental anatomy based on a systematic nomenclature (1998) · doi:10.1016/s0925-4773(98)00069-0 · 100 citations
- Mouse anatomy ontologies: enhancements and tools for exploring and integrating biomedical data (2015) · doi:10.1007/s00335-015-9584-9 · 48 citations