Ontology · Legacy

SOPHARM

Suggested Ontology for Pharmacogenomics

SO-Pharm is a formal ontology that represent domain knowledge in pharmacogenomics. To achieve this goal, SO-Pharm articulates ontologies from sub domains of phamacogenomics (i.e. genotype, phenotype, drug, trial representations). SO-Pharm enables to support knowledge about pharmacogenomic hypothesis, case study, and investigations in pharmacogenomics.

biomedical sciencechemical entitydruggenotypelife scienceontologypharmacogenomicsphenotype
E8

FAIR 23/48

Evaluated 26 Oct 2026

How scores work

Source & access

Homepageloria.fr Browse in BioPortalNCBO BioPortalBrowse in OBO FoundryOBO Foundry registry

Automated evaluation

F Findable FAIR12/12
  • Persistent identifier (F1)purl.obolibrary.org+4
  • Indexed in services (F4)4: BioPortal, OBO Foundry, Bioregistry, FAIRsharing+5
  • Citable reference (F2)doi:10.1007/978-1-4419-7046-6_36+3
A Accessible FAIR3/12
  • Homepage reachableHTTP 4040
  • Artefact retrievable over HTTP(S) (A1)no download or repository listed0
  • Metadata persists in a registry (A2)OBO Foundry, Bioregistry+3
I Interoperable FAIR8/12
  • Formal machine-readable format (I1)OWL, OBO+5
  • Semantic-web IRIs (I2)OWL, OBO+3
  • References other vocabularies (I3)no imported vocabularies found0
R Reusable FAIR0/12
  • Clear license (R1.1)none found0
  • Release provenance (R1.2)no version in artefact, registry or release tags0
  • Community standards (R1.3)no independent compliance report (not on the OBO Dashboard)0
Q Ontology consistency & quality0/20
  • Logical consistencynever checked by a reasoner0
  • OWL 2 DL profileprofile not checked0
  • Upper-ontology alignmentno BFO/COB/DOLCE import found0
  • Standard relations (RO)does not import the Relation Ontology0
  • ROBOT report: no errorsno ROBOT report available0
  • ROBOT report: warning densityno ROBOT report available0
  • Pitfall scan: no critical pitfallsno pitfall scan or ROBOT report yet0
M Maintenance0/16
  • Recencyno activity evidence0
  • Release cadence (12 months)0 releases0
U Community adoption0/16
  • Documented adopting projects0 projects0
  • Reused by other ontologies00
  • Community signalmax(stars 0 → 0, citations 6 → 0)0
P Penalties (inactivity & inconsistency)-15
  • No activity evidenceno commits, releases or dated files found-5
  • Inactive statusmarked legacy-10
  • Consistencynot yet checked by a reasoner0

FAIR subtotal 23/48 · earned 23/100 − 15 inactivity = 8/100 → grade E

Community adoption 0

No adopting projects documented yet.

Know a project that uses SOPHARM? Suggest it.

History & changes 1 run

History starts with the first archived run; changes appear after the next evaluation.

RunScoreFAIRVersion evaluatedTermsSnapshot
26 Oct 2026, 03:31 UTC8 E23——JSON

Provenance

Every fact on this page was fetched automatically. Each row shows where it came from and when. If a source fails, the last good value is kept and marked “carried forward”.

FactSourceRetrieved
Homepage link check (HTTP 404)loria.fr26 Oct 2026, 03:22 UTC
OBO Foundry status, license & usagesobofoundry.org26 Oct 2026, 02:37 UTC
Bioregistry mappings, dependencies & reusebioregistry.io26 Oct 2026, 03:22 UTC
Crossref citations (doi:10.1007/978-1-4419-7046-6_36)api.crossref.org26 Oct 2026, 03:22 UTC

Run 2026-10-26T02-37-38Z · evaluator v2.0.0 · rubric v3.4 · entry.json · run snapshot

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