Ontology
PW
Pathway ontology
The Pathway Ontology captures information on biological networks, the relationships between netweorks and the alterations or malfunctioning of such networks within a hierarchical structure. The five main branches of the ontology are: classic metabolic pathways, regulatory, signaling, drug, and disease pathwaysfor complex human conditions.
Source & access
- homepage rgd.mcw.edu HTTP 200
- repository github.com HTTP 200
- download purl.obolibrary.org HTTP 200
Portals & registries
| Source | ID | Version | Classes | Properties | Individuals | Loaded |
|---|---|---|---|---|---|---|
| OLS (EMBL-EBI) | pw | 2026-05-16 | 2,760 | 21 | 0 | 25 Oct 2026 |
| OBO Dashboard | pw | 2026-05-16 | 2,746 | — | — | 11 Jun 2026 |
Ontology IRI http://purl.obolibrary.org/obo/pw.owl
Version IRI http://purl.obolibrary.org/obo/pw/releases/2026-05-16/pw.owl
Languages en
Reused by (4)
ADO EPIO INO WIKIPATHWAYS
- Logical consistency
- consistent · 0 unsatisfiable
- OWL 2 DL
- no
- ROBOT report
- 45 errors · 229 warnings · 6 info
- OBO principles
- FP01FP02FP03FP04FP05FP06FP07FP08FP09FP11FP12FP16FP20
- Axioms
- 23,752 · 0.87% entities reused
Also registered as
aberowl: PW bioportal: PW fairsharing: FAIRsharing.f73xhd obofoundry: pw ols: pw ontobee: PW wikidata.entity: Q28864280
Automated evaluation
- Persistent identifier (F1)purl.obolibrary.org+4
- Indexed in services (F4)5: OLS, BioPortal, OBO Foundry, Bioregistry, FAIRsharing+5
- Citable reference (F2)doi:10.1186/s40246-014-0017-8+3
- Homepage reachableHTTP 200+3
- Artefact retrievable over HTTP(S) (A1)download HTTP 200+6
- Metadata persists in a registry (A2)OBO Foundry, Bioregistry+3
- Formal machine-readable format (I1)OWL, OBO+5
- Semantic-web IRIs (I2)OWL, OBO+3
- References other vocabularies (I3)imports 2: go, iao+2
- Clear license (R1.1)CC BY 4.0+5
- Release provenance (R1.2)2026-05-16 (version IRI in the artefact)+4
- Community standards (R1.3)OBO principles: 7/13 checks pass+2
- Logical consistencyconsistent, 0 unsatisfiable classes (OBO Dashboard)+10
- OWL 2 DL profileoutside OWL 2 DL0
- Upper-ontology alignmentno BFO/COB/DOLCE import found0
- Standard relations (RO)does not import the Relation Ontology0
- ROBOT report: no errors45 errors0
- ROBOT report: warning density229 warnings / 2746 classes = 0.080
- Pitfall scan: no critical pitfallsno pitfall scan yet; ROBOT report has 45 errors0
- Recency2026-10-18 → 0.3 months (≤ 3 months)+10
- Release cadence (12 months)1 release (OLS version IRI)+2
- Documented adopting projects0 projects0
- Reused by other ontologies4: ado, epio, ino, wikipathways+2
- Community signalmax(stars 1 → 0, citations 91 → 2)+2
- Time since last activity0.0 years → 4 × max(0, 0.0 − 1)0
- Inactive statusnot archived, legacy or inactive0
- Consistencyconsistent, no unsatisfiable classes0
- ROBOT report errors45 errors-6
FAIR subtotal 45/48 · earned 71/100 − 6 inactivity = 65/100 → grade C
History & changes 1 run
History starts with the first archived run; changes appear after the next evaluation.
| Run | Score | FAIR | Version evaluated | Terms | Snapshot |
|---|---|---|---|---|---|
| 26 Oct 2026, 03:31 UTC | 65 C | 45 | 2026-05-16 | 2,760 | JSON |
Provenance
Every fact on this page was fetched automatically. Each row shows where it came from and when. If a source fails, the last good value is kept and marked “carried forward”.
| Fact | Source | Retrieved |
|---|---|---|
| Homepage link check (HTTP 200) | rgd.mcw.edu | 26 Oct 2026, 03:16 UTC |
| Repository link check (HTTP 200) | github.com | 26 Oct 2026, 03:16 UTC |
| Download link check (HTTP 200) | purl.obolibrary.org | 26 Oct 2026, 03:16 UTC |
| Artefact header (version IRI) | download.rgd.mcw.edu | 26 Oct 2026, 03:16 UTC |
| Git refs (commit 5dfd607) | github.com | 26 Oct 2026, 03:16 UTC |
| GitHub repository statistics | api.github.com | 26 Oct 2026, 03:16 UTC |
| OLS classes, imports, version & release | ebi.ac.uk | 26 Oct 2026, 03:16 UTC |
| OBO Foundry status, license & usages | obofoundry.org | 26 Oct 2026, 02:37 UTC |
| Bioregistry mappings, dependencies & reuse | bioregistry.io | 26 Oct 2026, 03:16 UTC |
| OBO Dashboard (checked 11 Jun 2026) | dashboard.obofoundry.org | 26 Oct 2026, 02:37 UTC |
| Crossref citations (doi:10.1186/s40246-014-0017-8) | api.crossref.org | 26 Oct 2026, 03:16 UTC |
| Crossref citations (doi:10.1186/2041-1480-5-7) | api.crossref.org | 26 Oct 2026, 03:16 UTC |
Run 2026-10-26T02-37-38Z · evaluator v2.0.0 · rubric v3.4 · entry.json · run snapshot
How to cite
- Disease pathways at the Rat Genome Database Pathway Portal: genes in context-a network approach to understanding the molecular mechanisms of disease (2014) · doi:10.1186/s40246-014-0017-8 · 1 citations
- The pathway ontology - updates and applications (2014) · doi:10.1186/2041-1480-5-7 · 91 citations