Ontology

WIKIPATHWAYS

WikiPathways

WikiPathways is a database of biological pathways maintained by and for the scientific community.

biological regulationbiopaxdrug interactionepidemiologygenetic interaction (sensu unexpected)image/movieinteraction/pathwaymolecular interaction
C60

FAIR 45/48

Version 20251010

Evaluated 26 Oct 2026

How scores work

Source & access

Homepagewikipathways.org Repositorygithub.com DownloadCanonical file / PURL Browse in OLSEMBL-EBI Ontology Lookup ServiceBrowse in BioPortalNCBO BioPortal

Portals & registries

SourceIDVersionClassesPropertiesIndividualsLoaded
OLS (EMBL-EBI)wikipathways202510102,8991431,23125 Oct 2026

Ontology IRI https://w3id.org/biopragmatics/resources/wikipathways/wikipathways.ofn
Version IRI https://w3id.org/biopragmatics/resources/wikipathways/20251010/wikipathways.ofn

Languages en

Imports from (6)
CL DOID IAO NCBITaxon PW RO

Also registered as
fairsharing: FAIRsharing.g7b4rj ols: wikipathways wikidata.entity: Q7999828

Automated evaluation

F Findable FAIR12/12
  • Persistent identifier (F1)w3id.org+4
  • Indexed in services (F4)4: OLS, BioPortal, Bioregistry, FAIRsharing+5
  • Citable reference (F2)doi:10.1093/nar/gkad960+3
A Accessible FAIR12/12
  • Homepage reachableHTTP 200+3
  • Artefact retrievable over HTTP(S) (A1)download HTTP 200+6
  • Metadata persists in a registry (A2)Bioregistry+3
I Interoperable FAIR12/12
  • Formal machine-readable format (I1)OWL, OBO+5
  • Semantic-web IRIs (I2)OWL, OBO+3
  • References other vocabularies (I3)imports 6: cl, doid, iao, ncbitaxon, pw, ro+4
R Reusable FAIR9/12
  • Clear license (R1.1)CC0 1.0+5
  • Release provenance (R1.2)20251010 (version IRI in the artefact)+4
  • Community standards (R1.3)no independent compliance report (not on the OBO Dashboard)0
Q Ontology consistency & quality1/20
  • Logical consistencynever checked by a reasoner0
  • OWL 2 DL profileprofile not checked0
  • Upper-ontology alignmentno BFO/COB/DOLCE import found0
  • Standard relations (RO)imports RO+1
  • ROBOT report: no errorsno ROBOT report available0
  • ROBOT report: warning densityno ROBOT report available0
  • Pitfall scan: no critical pitfallsno pitfall scan or ROBOT report yet0
M Maintenance10/16
  • Recency2026-10-21 → 0.2 months (≤ 3 months)+10
  • Release cadence (12 months)0 releases0
U Community adoption4/16
  • Documented adopting projects0 projects0
  • Reused by other ontologies00
  • Community signalmax(stars 1 → 0, citations 821 → 4)+4
P Penalties (inactivity & inconsistency)0
  • Time since last activity0.0 years → 4 × max(0, 0.0 − 1)0
  • Inactive statusnot archived, legacy or inactive0
  • Consistencynot yet checked by a reasoner0

FAIR subtotal 45/48 · earned 60/100 = 60/100 → grade C

Community adoption 0

No adopting projects documented yet.

Know a project that uses WIKIPATHWAYS? Suggest it.

History & changes 1 run

History starts with the first archived run; changes appear after the next evaluation.

RunScoreFAIRVersion evaluatedTermsSnapshot
26 Oct 2026, 03:31 UTC60 C45202510102,899JSON

Provenance

Every fact on this page was fetched automatically. Each row shows where it came from and when. If a source fails, the last good value is kept and marked “carried forward”.

FactSourceRetrieved
Homepage link check (HTTP 200)wikipathways.org26 Oct 2026, 03:30 UTC
Repository link check (HTTP 200)github.com26 Oct 2026, 03:30 UTC
Download link check (HTTP 200)w3id.org26 Oct 2026, 03:30 UTC
Artefact header (version IRI)raw.githubusercontent.com26 Oct 2026, 03:30 UTC
Git refs (commit 3311623)github.com26 Oct 2026, 02:58 UTC
GitHub repository statisticsapi.github.com26 Oct 2026, 02:58 UTC
OLS classes, imports, version & releaseebi.ac.uk26 Oct 2026, 03:30 UTC
Bioregistry mappings, dependencies & reusebioregistry.io26 Oct 2026, 03:30 UTC
Crossref citations (doi:10.1093/nar/gkad960)api.crossref.org26 Oct 2026, 02:58 UTC
Crossref citations (doi:10.1093/nar/gkaa1024)api.crossref.org26 Oct 2026, 03:30 UTC

Run 2026-10-26T02-37-38Z · evaluator v2.0.0 · rubric v3.4 · entry.json · run snapshot

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