Ontology
MSIO
Metabolomics Standards Initiative Ontology
an application ontology for supporting description and annotation of mass-spectrometry and nmr-spectroscopy based metabolomics experiments and fluxomics studies.
Source & access
- homepage github.com HTTP 200
- repository github.com HTTP 200
- download raw.githubusercontent.com HTTP 200
Portals & registries
| Source | ID | Version | Classes | Properties | Individuals | Loaded |
|---|---|---|---|---|---|---|
| OLS (EMBL-EBI) | msio | 1.0.1 | 1,294 | 133 | 33 | 25 Oct 2026 |
| TIB Terminology Service | msio | 1.0.1 | 1,293 | 137 | 33 | 3 Mar 2024 |
Ontology IRI http://purl.obolibrary.org/obo/msio.owl
Languages de en en-us
Imports from (19)
BFO CHEBI CHMO CL DOID DUO GAZ GO IAO MS NCBITaxon NMR OBI OGMS PATO PR RO SO UO
Reused by (3)
ENM FOODON VALUESETS
Also registered as
fairsharing: FAIRsharing.4c7f91 ols: msio tib.ts: msio
Automated evaluation
- Persistent identifier (F1)no PURL / w3id / DOI for the artefact0
- Indexed in services (F4)4: OLS, TIB, Bioregistry, FAIRsharing+5
- Citable reference (F2)doi:10.1007/s11306-007-0069-z+3
- Homepage reachableHTTP 200+3
- Artefact retrievable over HTTP(S) (A1)download HTTP 200+6
- Metadata persists in a registry (A2)Bioregistry+3
- Formal machine-readable format (I1)OWL+5
- Semantic-web IRIs (I2)OWL+3
- References other vocabularies (I3)imports 19: bfo, chebi, chmo, cl, doid, duo, gaz, go…+4
- Clear license (R1.1)CC BY 3.0+5
- Release provenance (R1.2)1.0.1 (version info in the artefact)+4
- Community standards (R1.3)no independent compliance report (not on the OBO Dashboard)0
- Logical consistencynever checked by a reasoner0
- OWL 2 DL profileprofile not checked0
- Upper-ontology alignmentimports BFO+3
- Standard relations (RO)imports RO+1
- ROBOT report: no errorsno ROBOT report available0
- ROBOT report: warning densityno ROBOT report available0
- Pitfall scan: no critical pitfallsno pitfall scan or ROBOT report yet0
- Recency2025-10-19 → 12.2 months (≤ 2 years)+2
- Release cadence (12 months)0 releases0
- Documented adopting projects0 projects0
- Reused by other ontologies3: enm, foodon, valuesets+2
- Community signalmax(stars 9 → 1, citations 48 → 1)+1
- Time since last activity1.0 years → 4 × max(0, 1.0 − 1)0
- Inactive statusnot archived, legacy or inactive0
- Consistencynot yet checked by a reasoner0
FAIR subtotal 41/48 · earned 50/100 = 50/100 → grade D
Community adoption 0
No adopting projects documented yet.
Know a project that uses MSIO? Suggest it.
History & changes 1 run
History starts with the first archived run; changes appear after the next evaluation.
| Run | Score | FAIR | Version evaluated | Terms | Snapshot |
|---|---|---|---|---|---|
| 26 Oct 2026, 03:31 UTC | 50 D | 41 | 1.0.1 | 1,294 | JSON |
Provenance
Every fact on this page was fetched automatically. Each row shows where it came from and when. If a source fails, the last good value is kept and marked “carried forward”.
| Fact | Source | Retrieved |
|---|---|---|
| Homepage link check (HTTP 200) | github.com | 26 Oct 2026, 03:06 UTC |
| Repository link check (HTTP 200) | github.com | 26 Oct 2026, 03:06 UTC |
| Download link check (HTTP 200) | raw.githubusercontent.com | 26 Oct 2026, 03:06 UTC |
| Artefact header (version info) | raw.githubusercontent.com | 26 Oct 2026, 03:06 UTC |
| Git refs (commit ebd2457) | github.com | 26 Oct 2026, 03:06 UTC |
| GitHub repository statistics | api.github.com | 26 Oct 2026, 03:06 UTC |
| OLS classes, imports, version & release | ebi.ac.uk | 26 Oct 2026, 03:06 UTC |
| TIB Terminology Service metrics | service.tib.eu | 26 Oct 2026, 03:06 UTC |
| Bioregistry mappings, dependencies & reuse | bioregistry.io | 26 Oct 2026, 03:06 UTC |
| Crossref citations (doi:10.1007/s11306-007-0069-z) | api.crossref.org | 26 Oct 2026, 03:06 UTC |
Run 2026-10-26T02-37-38Z · evaluator v2.0.0 · rubric v3.4 · entry.json · run snapshot
How to cite
- Metabolomics standards initiative: ontology working group work in progress (2007) · doi:10.1007/s11306-007-0069-z · 48 citations