Ontology

ZP

Zebrafish Phenotype Ontology

The Zebrafish Phenotype Ontology formally defines all phenotypes of the Zebrafish model organism.

oboontology
B70

FAIR 44/48

Version 2026-10-08

Evaluated 26 Oct 2026

How scores work

Source & access

Homepagegithub.com DownloadCanonical file / PURL Browse in OLSEMBL-EBI Ontology Lookup ServiceBrowse in BioPortalNCBO BioPortalBrowse in OBO FoundryOBO Foundry registry

Portals & registries

SourceIDVersionClassesPropertiesIndividualsLoaded
OLS (EMBL-EBI)zp2026-10-0871,772114025 Oct 2026
OBO Dashboardzp2024-04-1855,395——11 Dec 2025

Ontology IRI http://purl.obolibrary.org/obo/zp.owl
Version IRI http://purl.obolibrary.org/obo/zp/releases/2026-10-08/zp.owl

Languages en

Imports from (12)
BFO BSPO CHEBI GO IAO MPATH OMO PATO RO ZFA ZFS UBERON

Reused by (2)
GENO UPHENO

Logical consistency
consistent · 0 unsatisfiable
OWL 2 DL
yes
ROBOT report
92 errors · 3,954 warnings · 0 info
OBO principles
FP01FP02FP03FP04FP05FP06FP07FP08FP09FP11FP12FP16FP20
Axioms
307,072 · 14.26% entities reused

Also registered as
aberowl: ZP bioportal: ZP obofoundry: zp ols: zp ontobee: ZP wikidata.entity: Q81661852

Automated evaluation

F Findable FAIR9/12
  • Persistent identifier (F1)purl.obolibrary.org+4
  • Indexed in services (F4)4: OLS, BioPortal, OBO Foundry, Bioregistry+5
  • Citable reference (F2)no reference publication listed0
A Accessible FAIR12/12
  • Homepage reachableHTTP 200+3
  • Artefact retrievable over HTTP(S) (A1)download HTTP 200+6
  • Metadata persists in a registry (A2)OBO Foundry, Bioregistry+3
I Interoperable FAIR12/12
  • Formal machine-readable format (I1)OWL, OBO+5
  • Semantic-web IRIs (I2)OWL, OBO+3
  • References other vocabularies (I3)imports 12: bfo, bspo, chebi, go, iao, mpath, omo, pato…+4
R Reusable FAIR11/12
  • Clear license (R1.1)CC BY 3.0+5
  • Release provenance (R1.2)2026-10-08 (version IRI in the artefact)+4
  • Community standards (R1.3)OBO principles: 9/13 checks pass+2
Q Ontology consistency & quality16/20
  • Logical consistencyconsistent, 0 unsatisfiable classes (OBO Dashboard)+10
  • OWL 2 DL profilein OWL 2 DL+2
  • Upper-ontology alignmentimports BFO+3
  • Standard relations (RO)imports RO+1
  • ROBOT report: no errors92 errors0
  • ROBOT report: warning density3954 warnings / 55395 classes = 0.070
  • Pitfall scan: no critical pitfallsno pitfall scan yet; ROBOT report has 92 errors0
M Maintenance12/16
  • Recency2026-10-08 → 0.6 months (≤ 3 months)+10
  • Release cadence (12 months)1 release (GitHub releases)+2
U Community adoption4/16
  • Documented adopting projects1 project+2
  • Reused by other ontologies2: geno, upheno+1
  • Community signalmax(stars 9 → 1, citations 0 → 0)+1
P Penalties (inactivity & inconsistency)-6
  • Time since last activity0.0 years → 4 × max(0, 0.0 − 1)0
  • Inactive statusnot archived, legacy or inactive0
  • Consistencyconsistent, no unsatisfiable classes0
  • ROBOT report errors92 errors-6

FAIR subtotal 44/48 · earned 76/100 − 6 inactivity = 70/100 → grade B

Community adoption 1

  • monarchinitiative.org

    Monarch integrates phenotype annotations from sources such as ZFIIN, and allows for querying using the ZP ontology.

    Source: OBO Foundry registry

Know a project that uses ZP? Suggest it.

History & changes 1 run

History starts with the first archived run; changes appear after the next evaluation.

RunScoreFAIRVersion evaluatedTermsSnapshot
26 Oct 2026, 03:31 UTC70 B442026-10-0871,772JSON

Provenance

Every fact on this page was fetched automatically. Each row shows where it came from and when. If a source fails, the last good value is kept and marked “carried forward”.

FactSourceRetrieved
Homepage link check (HTTP 200)github.com26 Oct 2026, 03:31 UTC
Repository link check (HTTP 200)github.com26 Oct 2026, 03:31 UTC
Download link check (HTTP 200)purl.obolibrary.org26 Oct 2026, 03:31 UTC
Artefact header (version IRI)release-assets.githubusercontent.com26 Oct 2026, 03:31 UTC
Git refs (commit cf37a0e, latest tag v2026-10-08)github.com26 Oct 2026, 03:31 UTC
GitHub repository statisticsapi.github.com26 Oct 2026, 03:31 UTC
OLS classes, imports, version & releaseebi.ac.uk26 Oct 2026, 03:31 UTC
OBO Foundry status, license & usagesobofoundry.org26 Oct 2026, 02:37 UTC
Bioregistry mappings, dependencies & reusebioregistry.io26 Oct 2026, 03:31 UTC
OBO Dashboard (checked 11 Dec 2025)dashboard.obofoundry.org26 Oct 2026, 02:37 UTC

Run 2026-10-26T02-37-38Z · evaluator v2.0.0 · rubric v3.4 · entry.json · run snapshot