Ontology

MPATH

Mouse pathology ontology

A structured controlled vocabulary of mutant and transgenic mouse pathology phenotypes

anatomybiomedical sciencediseasehistological assaymousemutationoboontology
D44

FAIR 44/48

Version 2020-05-19

Evaluated 26 Oct 2026

How scores work

Source & access

Homepagepathbase.net Repositorygithub.com DownloadCanonical file / PURL Browse in OLSEMBL-EBI Ontology Lookup ServiceBrowse in BioPortalNCBO BioPortalBrowse in OBO FoundryOBO Foundry registry

Portals & registries

SourceIDVersionClassesPropertiesIndividualsLoaded
OLS (EMBL-EBI)mpath2020-05-1989122025 Oct 2026
OBO Dashboardmpath2020-05-19891——9 Dec 2025

Ontology IRI http://purl.obolibrary.org/obo/mpath.owl
Version IRI http://purl.obolibrary.org/obo/mpath/2020-05-19/mpath.owl

Languages en

Imports from (1)
IAO

Reused by (10)
HP MP ZP ADO BMONT CIDO EFO GENEPIO PRIDE UPHENO

Logical consistency
consistent · 0 unsatisfiable
OWL 2 DL
no
ROBOT report
23 errors · 150 warnings · 41 info
OBO principles
FP01FP02FP03FP04FP05FP06FP07FP08FP09FP11FP12FP16FP20
Axioms
6,466 · 2.4% entities reused

Also registered as
aberowl: MPATH bioportal: MPATH fairsharing: FAIRsharing.3wbgm0 obofoundry: mpath ols: mpath ontobee: MPATH wikidata.entity: Q55118458

Automated evaluation

F Findable FAIR12/12
  • Persistent identifier (F1)purl.obolibrary.org+4
  • Indexed in services (F4)5: OLS, BioPortal, OBO Foundry, Bioregistry, FAIRsharing+5
  • Citable reference (F2)doi:10.1177/0300985810374845+3
A Accessible FAIR12/12
  • Homepage reachableHTTP 200+3
  • Artefact retrievable over HTTP(S) (A1)download HTTP 200+6
  • Metadata persists in a registry (A2)OBO Foundry, Bioregistry+3
I Interoperable FAIR10/12
  • Formal machine-readable format (I1)OWL, OBO+5
  • Semantic-web IRIs (I2)OWL, OBO+3
  • References other vocabularies (I3)imports 1: iao+2
R Reusable FAIR10/12
  • Clear license (R1.1)CC BY 3.0+5
  • Release provenance (R1.2)2020-05-19 (version IRI in the artefact)+4
  • Community standards (R1.3)OBO principles: 5/13 checks pass+1
Q Ontology consistency & quality10/20
  • Logical consistencyconsistent, 0 unsatisfiable classes (OBO Dashboard)+10
  • OWL 2 DL profileoutside OWL 2 DL0
  • Upper-ontology alignmentno BFO/COB/DOLCE import found0
  • Standard relations (RO)does not import the Relation Ontology0
  • ROBOT report: no errors23 errors0
  • ROBOT report: warning density150 warnings / 891 classes = 0.170
  • Pitfall scan: no critical pitfallsno pitfall scan yet; ROBOT report has 23 errors0
M Maintenance0/16
  • Recency2023-09-30 → 36.8 months (older / unknown)0
  • Release cadence (12 months)0 releases (OLS version IRI)0
U Community adoption4/16
  • Documented adopting projects0 projects0
  • Reused by other ontologies10: hp, mp, zp, ado, bmont, cido…+3
  • Community signalmax(stars 0 → 0, citations 46 → 1)+1
P Penalties (inactivity & inconsistency)-14
  • Time since last activity3.1 years → 4 × max(0, 3.1 − 1)-8
  • Inactive statusnot archived, legacy or inactive0
  • Consistencyconsistent, no unsatisfiable classes0
  • ROBOT report errors23 errors-6

FAIR subtotal 44/48 · earned 58/100 − 14 inactivity = 44/100 → grade D

Community adoption 0

No adopting projects documented yet.

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History & changes 1 run

History starts with the first archived run; changes appear after the next evaluation.

RunScoreFAIRVersion evaluatedTermsSnapshot
26 Oct 2026, 03:31 UTC44 D442020-05-19891JSON

Provenance

Every fact on this page was fetched automatically. Each row shows where it came from and when. If a source fails, the last good value is kept and marked “carried forward”.

FactSourceRetrieved
Homepage link check (HTTP 200)pathbase.net26 Oct 2026, 03:06 UTC
Repository link check (HTTP 200)github.com26 Oct 2026, 03:06 UTC
Download link check (HTTP 200)purl.obolibrary.org26 Oct 2026, 03:06 UTC
Artefact header (version IRI)raw.githubusercontent.com26 Oct 2026, 03:06 UTC
Git refs (commit edfc3b4)github.com26 Oct 2026, 03:06 UTC
GitHub repository statisticsapi.github.com26 Oct 2026, 03:06 UTC
OLS classes, imports, version & releaseebi.ac.uk26 Oct 2026, 03:06 UTC
OBO Foundry status, license & usagesobofoundry.org26 Oct 2026, 02:37 UTC
Bioregistry mappings, dependencies & reusebioregistry.io26 Oct 2026, 03:06 UTC
OBO Dashboard (checked 9 Dec 2025)dashboard.obofoundry.org26 Oct 2026, 02:37 UTC
Crossref citations (doi:10.1177/0300985810374845)api.crossref.org26 Oct 2026, 03:06 UTC

Run 2026-10-26T02-37-38Z · evaluator v2.0.0 · rubric v3.4 · entry.json · run snapshot

How to cite