Ontology · Legacy

PRIDE

Proteomics Identification Database Ontology

The PRIDE PRoteomics IDEntifications database is a centralized, standards compliant, public data repository that provides protein and peptide identifications together with supporting evidence. This collection references experiments and assays.

ontologyprideproteinproteomic databasesrepository
D51

FAIR 36/48

Version 2026-09-22

Evaluated 26 Oct 2026

How scores work

Source & access

Homepagegithub.com DownloadCanonical file / PURL Browse in OLSEMBL-EBI Ontology Lookup Service

Portals & registries

SourceIDVersionClassesPropertiesIndividualsLoaded
OLS (EMBL-EBI)pride2026-09-2298,92852215025 Oct 2026

Ontology IRI http://purl.obolibrary.org/obo/pride.owl
Version IRI http://purl.obolibrary.org/obo/pride/releases/2026-09-22/pride.owl

Languages be bg da de en fr sq tr

Imports from (52)
AfPO BAO BFO BTO CHEBI CHMO CL CLO COB DOID ECTO EFO ENVO FBbi FBbt FBdv GAZ GENEPIO GO GSSO HANCESTRO HP IAO IDO MA MMO MONDO MP MPATH MS NCBITaxon NCIT OBA OBCS OBI OGMS OMIT OMO ORPHA PATO PECO PO PR RO SCHEMAORG_HTTPS SEMAPV SO TO UBERON UO WBls ZFA

Also registered as
ols: pride

Automated evaluation

F Findable FAIR6/12
  • Persistent identifier (F1)no PURL / w3id / DOI for the artefact0
  • Indexed in services (F4)2: OLS, Bioregistry+3
  • Citable reference (F2)doi:10.1093/nar/gkab1038+3
A Accessible FAIR12/12
  • Homepage reachableHTTP 200+3
  • Artefact retrievable over HTTP(S) (A1)download HTTP 200+6
  • Metadata persists in a registry (A2)Bioregistry+3
I Interoperable FAIR12/12
  • Formal machine-readable format (I1)OWL+5
  • Semantic-web IRIs (I2)OWL+3
  • References other vocabularies (I3)imports 52: afpo, bao, bfo, bto, chebi, chmo, cl, clo…+4
R Reusable FAIR6/12
  • Clear license (R1.1)http://www.ebi.ac.uk/Information/termsofuse.html (not a recognised open license)+2
  • Release provenance (R1.2)2026-09-22 (version IRI in the artefact)+4
  • Community standards (R1.3)no independent compliance report (not on the OBO Dashboard)0
Q Ontology consistency & quality4/20
  • Logical consistencynever checked by a reasoner0
  • OWL 2 DL profileprofile not checked0
  • Upper-ontology alignmentimports BFO, COB+3
  • Standard relations (RO)imports RO+1
  • ROBOT report: no errorsno ROBOT report available0
  • ROBOT report: warning densityno ROBOT report available0
  • Pitfall scan: no critical pitfallsno pitfall scan or ROBOT report yet0
M Maintenance16/16
  • Recency2026-10-22 → 0.1 months (≤ 3 months)+10
  • Release cadence (12 months)10 releases (dated git tags)+6
U Community adoption5/16
  • Documented adopting projects0 projects0
  • Reused by other ontologies00
  • Community signalmax(stars 3 → 0, citations 6872 → 5)+5
P Penalties (inactivity & inconsistency)-10
  • Time since last activity0.0 years → 4 × max(0, 0.0 − 1)0
  • Inactive statusmarked legacy-10
  • Consistencynot yet checked by a reasoner0

FAIR subtotal 36/48 · earned 61/100 − 10 inactivity = 51/100 → grade D

Community adoption 0

No adopting projects documented yet.

Know a project that uses PRIDE? Suggest it.

History & changes 1 run

History starts with the first archived run; changes appear after the next evaluation.

RunScoreFAIRVersion evaluatedTermsSnapshot
26 Oct 2026, 03:31 UTC51 D362026-09-2298,928JSON

Provenance

Every fact on this page was fetched automatically. Each row shows where it came from and when. If a source fails, the last good value is kept and marked “carried forward”.

FactSourceRetrieved
Homepage link check (HTTP 200)github.com26 Oct 2026, 03:16 UTC
Repository link check (HTTP 200)github.com26 Oct 2026, 03:16 UTC
Download link check (HTTP 200)raw.githubusercontent.com26 Oct 2026, 03:16 UTC
Artefact header (version IRI)raw.githubusercontent.com26 Oct 2026, 03:16 UTC
Git refs (commit 473a7b8, latest tag v2026-09-22)github.com26 Oct 2026, 03:16 UTC
GitHub repository statisticsapi.github.com26 Oct 2026, 03:16 UTC
OLS classes, imports, version & releaseebi.ac.uk26 Oct 2026, 03:16 UTC
Bioregistry mappings, dependencies & reusebioregistry.io26 Oct 2026, 03:16 UTC
Crossref citations (doi:10.1093/nar/gkab1038)api.crossref.org26 Oct 2026, 03:16 UTC
Crossref citations (doi:10.1093/nar/gky1106)api.crossref.org26 Oct 2026, 03:16 UTC

Run 2026-10-26T02-37-38Z · evaluator v2.0.0 · rubric v3.4 · entry.json · run snapshot

How to cite